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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28317200
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSEECVVAFQ IGYNFRVTGW NWDMNRTPKM LNSKVAGYSS LITFAILLIA WLAGFSSRLF  60
   61 AVIRFESIIH EFDPWFNYRA TAYMVQNGWY NFLNWFDERA WYPLGRIVGG TVYPGLMITS 120
  121 GGIHWLLHVL NIPVHIRDIC VFLAPIFSGL TSISTYLLTK ELWSAGAGLF AASFIAIVPG 180
  181 YISRSVAGSY DNEGIAIFAL QFTYFLWVRS VKTGSVFWSA AAALSYFYMV SAWGGYVFII 240
  241 NLIPLHVFVL LIMGRYSPRL LTSYSTFYIL GLLFSMQIPF VGFQPIRTSE HMAALGVFVL 300
  301 LMAVATLRHL QSVLSRNEFR KLFIVGGLLV GVGVFVAVVV LTMLGVVAPW SGRFYSLWDT 360
  361 GYAKIHIPII ASVSEHQPTT WFSFFFDLHI LVCAFPVGVW YCIKQINDER VFVVLYAISA 420
  421 VYFAGVMVRL MLTLTPVVCM LAGVAFSGLL DVFLQEDSSK RMGTAISAAT EVDEAEDSIE 480
  481 KKTLYDKAGK LKHRTKHDAQ QDTGVSSNLK SIVILAVLML LMMFAVHCTW VTSNAYSSPS 540
  541 IVLAFHNSQD GSRNILDDFR EAYYWLSQNT ADDARVMSWW DYGYQIAGMA NRTTLVDNNT 600
  601 WNNSHIALVG KAMSSTEEKS YEIMTSLDVD YVLVIFGGVI GYSGDDINKF LWMVRIAEGE 660
  661 HPKDIKESDY FTDRGEFRVD AEGAPALLNC LMYKLSYYRF GELKLDYRGP SGYDRTRNAV 720
  721 IGNKDFDLTY LEEAYTTEHW LVRIYRVKKP HEFNRPSLKT KERTIPPANF ISRKNSKRRK 780
  781 GYIRNRPVVV KGKRTLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle