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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28316954
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFIVRKFVGC WSLWTNLYLI FKHLLNPDVN AFQRKFVNEV RRCDEMERKL RYLEKEIKKD  60
   61 GIPMLDTGES PEAPQPREMI DLEATFEKLE NELREVNQNA EALKRNFLEL TELKHILRKT 120
  121 QVFFDEMADN QNEDEQAQLL GEEGVRASQP GQNLKLGFVA GVILRERLPA FERMLWRACK 180
  181 GNVFLRQAMI ETPLEDPTNG DQVHKSVFII FFQGDQLKTR VKKICEGFRA TLYPCPEAPA 240
  241 DRREMAMGVM TRIEDLNTVL GQTQDHRHRV LVAAAKNLKN WFVKVRKIKA IYHTLNLFNL 300
  301 DVTQKCLIAE CWVPLLDIET IQLALRRGTE RSGSSVPPIL NRMQTFENPP TYNRTNKFTK 360
  361 AFQALIDAYG VASYREMNPA PYTIITFPFL FAVMFGDLGH GAIMALFGLW MIRKEKGLAA 420
  421 QKTDNEIWNI FFGGRYIIFL MGVFSMYTGL IYNDIFSKSL NIFGSHWHLS YNKSTVMENK 480
  481 FLQLSPKGDY EGAPYPFGMD PIWQVAGANK IIFHNAYKMK ISIIFGVIHM IFGVVMSWHN 540
  541 HTYFRNRISL LYEFIPQLVF LLLLFFYMVL LMFIKWIKFA ATNDKPYSEA CAPSILITFI 600
  601 DMVLFNTPKP PPENCETYMF MGQHFIQVLF VLVAVGCIPV MLLAKPLLIM QARKQANVQP 660
  661 IAGATSDAEA GGVSNSGSHG GGGGHEEEEE LSEIFIHQSI HTIEYVLGSV SHTASYLRLW 720
  721 ALSLAHAQLA EVLWTMVLSI GLKQEGPVGG IVLTCVFAFW AILTVGILVL MEGLSAFLHT 780
  781 LRLHWVEFQS KFYKGQGYAF QPFSFDAIIE NGAAAAEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle