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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28316878
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQPSQSGAA QALNGQHPEL AFADADTDGD ERLEEHGQEQ EQLQLLGAMP RKQSLSERRN  60
   61 VDLPHLKMVN EKEPESATPS PEAFAPGLRR NSISMPSGIN ALDLEALRLR HQMQPQDALH 120
  121 EEIIADDATS SLGTPATPDT PGTTAPTTTA NTPDKAINFA NDDSDDEFGN ARRPVHRDRF 180
  181 RSRRRASIAP LPALRLNSKE MLASDFDSHS LASNQASITS VNSLASLLRE KMQAFPQLIR 240
  241 KKKRETKDYK IKIFVIIMFF IIIFLIGYAY VAYHQQVLTR SYFQKIKFNS HDRIFRILSH 300
  301 EDKEVISGQL GVTLGFDTAP FHCLEEQRRS DGSVCIEWNG VARLHLNFED KGVFRCYTLQ 360
  361 WQALTPGLLP TDCYELKRDN GLWFGGGVTK GQEWSLSYAN FDFAPYASGD SKIHQFGNGV 420
  421 KRYFINSIGV AMQVSEKTPL QLGVNRTENR FCLRAANDEF TFVNHLTPLP QLDYRICTTE 480
  481 DMRSLHMLMT QQSLWDGLKE QEFKVLHSLL EEPVWRIPHT ELPESLNESA ICDYSESAIA 540
  541 MGLGHIVINE FWQENIGDFT VDKARFPTLK DTIDVLHRRG FKVVLTIQPF ISTDSANFKD 600
  601 AVKRKLLIYE RHSERSIPAL TRYKSSSSAG VLDITNNASV PWLLEKLQRL KEEYGVQSFY 660
  661 LDLGTGYNLP HYYQCRQTLD NPDTYARLFT ASLEGAGLMA VSTASVVPKP PTFLSTPPAN 720
  721 ATWEGLRETL GAVLNYGVIG YPFVLPGVIG GDYLLQRPLS KMVSFYSLSQ PPLPDPELFI 780
  781 RWLQLATFMP AMQFSHLPSE YRSDLVTRVA QELKEVRQLI VIPLLKKYLN PSMNEGLPLV 840
  841 RPLWMMNPHD PACLIVSDEF SVGEELIVAP ILHANREERE VYLPQGVWKD GIDGSLRKGS 900
  901 RWMHGYRVPK DKIAYFRKMP DNTRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle