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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y5720_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLNFFLPFF FFFILLRVSA GAEPNYFNSL LPSDAVALLS FKSTADLDNK LLYSLTERYD  60
   61 YCQWRGVKCA QGRIVRLVLS GVGLRGYFSS ATLSRLDQLR VLSLENNSLF GPIPDLSHLV 120
  121 NLKSLFLSRN QFSGAFPPSI LSLHRLMILS ISHNNFSGSI PSEINALDRL TSLNLDFNRF 180
  181 NGTLPSLNQS FLTSFNVSGN NLTGVIPVTP TLSRFDASSF RSNPGLCGEI INRACASRSP 240
  241 FFGSTNKTTS SEAPLGQSAQ AQNGGAVVIP PVVTKKKGKE SGLVLGFTAG LASLIVLGLC 300
  301 LVVFSLVIKK RNDDGIYEPN PKGEASLSQQ QQSQNQTPRT RAVPVLNSDT ESQKREKEVQ 360
  361 FQETEQRIPN SGNLVFCGES RSQGMYTMEQ LMRASAELLG RGSVGITYKA VLDNQLIVTV 420
  421 KRLDAAKTAV TSEEAFENHM EIVGGLRHTN LVPIRSYFQS NGERLIIYDY HPNGSLFNLI 480
  481 HGSRSSRAKP LHWTSCLKIA EDVAQGLYYI HQTSSALVHG NLKSTNILLG QDFEACLTDY 540
  541 CLSVLTDSSS ASPDDPDSSS YKAPEIRKSS RRPTSKCDVY SFGVLIFELL TGKNASRHPF 600
  601 MAPHDMLDWV RAMREEEEGT EDNRLGMMTE TACLCRVTSP EQRPTMRQVI KMIQEIKESV 660
  661 MAEENDPFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle