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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20151705
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEIREDEEE KKSGISILPG PELLALPGFD TRASIASAAL SDVPSDVIIK SRIRYGSPLS  60
   61 ACKGLLLEYA KSTTIHGIRY IFEVHRPIYE KLYWLFFTCI SVYFAVSLIW DTYLKWQESP 120
  121 VILGFDETLV PVHKIPFPTI TICPEIKMER NVFDYTNVSR QLWEEYKQNG NISDLDDEDL 180
  181 ARMAVAMHIC DSEVVQRFTP LLSQLNPPNV DVTQTLIDLS ISKNETGPFC KWNGRFYFCD 240
  241 KIFDFVATDE GICYQFNGLR PKDIYRDEKF ISYVDPDVVD FNKYFDVDLP PWNNITGNWS 300
  301 LDTGFVDQGQ NAYPQRTVFS SVKNGFFAFL QGLQHNFDYD CRSFKQGYKV FLNSPESVPL 360
  361 TTGNYILVPH GDEVLVSVLP AYVVSTDNLH EITPEKRQCL FDDERSLRFF RSYSQSNCQT 420
  421 ECLANYTVSK CGCAKFWMPK PLGTPVCGLK DISCYTSAQD ELYTLMQNQT MAKSIDESVD 480
  481 ITCNCMPACT SLEYNFEISR AKYDVAKTIR AFREEYEHTD AIGSRLSVYF KEHQFTAIKR 540
  541 TILFGVSTLI SNCGGICGLF MGISCLSFLE LIYFFCMRIC GSCRDRRKHK IQQQNSVDLP 600
  601 EEKSEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle