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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25308068
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSRYVRVS SGSSMNPNFR NFALWAVIAL LLIALFSMFQ TSPTQTGSRE IPYSQFIRDV  60
   61 DSGRVRDVTV TGNRVLGTYT ENGTAFQTYS PVIDDSLMER LQSKNVTIVA RPESDGSSGF 120
  121 LSYLGTLLPM FLILGVWLFF MRQMQGGSRG AMGFGKSKAK LLTEAHGRVT FDDVAGVDEA 180
  181 KQDLEEIVEF LRDPQKFQRL GGKIPRGVLL VGPPGTGKTL LARSVAGEAN VPFFTISGSD 240
  241 FVEMFVGVGA SRVRDMFEQA KKNAPCIIFI DEIDAVGRHR GAGLGGGNDE REQTLNQLLV 300
  301 EMDGFEANEG IILIAATNRP DVLDPALLRP GRFDRQVVVP NPDIVGRERI LKVHVRNVPL 360
  361 APNVDLKILA RGTPGFSGAD LMNLVNEAAL MAARRNKRVV TMQEFEDAKD KIMMGAERRS 420
  421 SAMTEAEKKL TAYHEAGHAI TALKVAVADP LHKATIIPRG RALGMVMQLP EGDRYSMSYK 480
  481 WMVSRLVIMM GGRVAEELTF GKENITSGAS SDIEQATKLA RAMVTQWGFS DALGQVAYGE 540
  541 NQQEVFLGHS VSQSKNVSEA TAQTIDTEVR RLIDEAYTEA RRILTDNHDG FVAIAEGLLE 600
  601 YETLTGEEIK ALLRGEKPAR DLGDDSPGSR GSAVPKAGAK KDGPSEAKGD GEAEGGMEPQ 660
  661 PH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle