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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AHK2_ARATH
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSITCELLNL TSKKAKKSSS SDKKWLKKPL FFLILCGSLV IVLVMFLRLG RSQKEETDSC  60
   61 NGEEKVLYRH QNVTRSEIHD LVSLFSDSDQ VTSFECHKES SPGMWTNYGI TCSLSVRSDK 120
  121 QETRGLPWNL GLGHSISSTS CMCGNLEPIL QQPENLEEEN HEEGLEQGLS SYLRNAWWCL 180
  181 ILGVLVCHKI YVSHSKARGE RKEKVHLQEA LAPKKQQQRA QTSSRGAGRW RKNILLLGIL 240
  241 GGVSFSVWWF WDTNEEIIMK RRETLANMCD ERARVLQDQF NVSLNHVHAL SILVSTFHHG 300
  301 KIPSAIDQRT FEEYTERTNF ERPLTSGVAY ALKVPHSERE KFEKEHGWAI KKMETEDQTV 360
  361 VQDCVPENFD PAPIQDEYAP VIFAQETVSH IVSVDMMSGE EDRENILRAR ASGKGVLTSP 420
  421 FKLLKSNHLG VVLTFAVYDT SLPPDATEEQ RVEATIGYLG ASYDMPSLVE KLLHQLASKQ 480
  481 TIAVDVYDTT NTSGLIKMYG SEIGDISEQH ISSLDFGDPS RNHEMHCRFK HKLPIPWTAI 540
  541 TPSILVLVIT FLVGYILYEA INRIATVEED CQKMRELKAR AEAADIAKSQ FLATVSHEIR 600
  601 TPMNGVLGML KMLMDTDLDA KQMDYAQTAH GSGKDLTSLI NEVLDQAKIE SGRLELENVP 660
  661 FDMRFILDNV SSLLSGKANE KGIELAVYVS SQVPDVVVGD PSRFRQIITN LVGNSIKFTQ 720
  721 ERGHIFISVH LADEVKEPLT IEDAVLKQRL ALGCSESGET VSGFPAVNAW GSWKNFKTCY 780
  781 STESQNSDQI KLLVTVEDTG VGIPVDAQGR IFTPFMQADS STSRTYGGTG IGLSISKRLV 840
  841 ELMQGEMGFV SEPGIGSTFS FTGVFGKAET NTSITKLERF DLAIQEFTGL RALVIDNRNI 900
  901 RAEVTRYELR RLGISADIVS SLRMACTCCI SKLENLAMIL IDKDAWNKEE FSVLDELFTR 960
  961 SKVTFTRVPK IFLLATSATL TERSEMKSTG LIDEVVIKPL RMSVLICCLQ ETLVNGKKRQ1020
 1021 PNRQRRNLGH LLREKQILVV DDNLVNRRVA EGALKKYGAI VTCVESGKAA LAMLKPPHNF1080
 1081 DACFMDLQMP EMDGFEATRR VRELEREINK KIASGEVSAE MFCKFSSWHV PILAMTADVI1140
 1141 QATHEECMKC GMDGYVSKPF EEEVLYTAVA RFFEPC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle