YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16904253
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRFLTPARI TLLVIIYLYQ SDQVSTTSSR DVIYFIACRT ALASEYDVGT VDDRNSLCSS  60
   61 EIHSIAESLQ QWSSRVPGRS MYDVLLQALW SLEGLDSLHT LISQLRRTTE TRGLIDEETG 120
  121 CRPVTPSSPL GQFLRRSHVE FTRLQFADSQ NLWKAFAAYR APTFDEWGAR NPEQCAEYLE 180
  181 KESSVDMLAL SRISTLRVSE SASDASAFDT DMLLGFTITQ LQKLGARVPD DVKSRLETWI 240
  241 GHQADSGTQS LHFFMAYFEH WRAGQYNMAL ESLHRYFDYS LTSGSGGDNM KVFYQYALLH 300
  301 LSVLHADFEC WDESVDAMNE CIATARENQD SACLNYALSW LLHLRHAHPD QDHSSYGSIS 360
  361 GVVGSGGGEQ DEITFLKTKA REGKHWLLLS GTLLEEARFE MFSVRCSPDG LTHRRADRLA 420
  421 GR

Type	Start	End	Confidence
Signal Peptide	1	23	0.51
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	422	0.99