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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLB3_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSSSSLPP LCEKISYKNY FLRVVDLTIL GFLFSLLLYR ILLMNQNNSV WVVAFLCESF  60
   61 FSFIWLLITS IKWSPASYKS YPERLDERVH DLPSVDMFVT TADPVREPPI LVANTLLSLL 120
  121 AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNIKVRAP FRYFLNPPAA 180
  181 TESSEFSKDW EITKREYEKL SRRVEDATGD SHWLDAEDDF EDFSNTKPND HSTIVKVVWE 240
  241 NKGGVGVENE VPHFVYISRE KRPNYLHHYK AGAMNFLVRV SGLMTNAPYM LNVDCDMYAN 300
  301 EADVVRQAMC IFLQKSMNSN HCAFVQFPQE FYDSNADELT VLQSYLGRGI AGIQGPTYAG 360
  361 SGCFHTRRVM YGLSIDDLED DGSLSSLATR KYLAEENLAR EFGNSNEMVT SVVEALQRKP 420
  421 NPQNTLANSL EAAQEVGHCH FEYQTSWGKT IGWLYESTAE DANTSIGIHS RGWTSSYISP 480
  481 KPPAFLGAMP PGGPEAMLQQ RRWATGLLEV LFNKQSPLIG MFCRKIRFRQ SLAYLYIFTW 540
  541 GLRSIPELIY CLLPAYCLLH NAALFPKGVY LGIVVTLVGM HCLYSLWEFM SLGFSVQSWF 600
  601 ASQSFWRIKT TCSWLFSIPD IILKLLGISK TVFIVTKKTM PKTMSGSGSE KSQREVDCPN 660
  661 QDSGKFEFDG SLYFLPGTFI LLVNLAALAG CSVGLQRHRG GGSGLAEACG CILVVILFLP 720
  721 FLKGMFEKGK YGIPWSTLSK AAFLAVLFVV FSVGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle