YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19699035
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGILAVLCA ENSQAKRVRV LELSRRLKHR GPDWSGLHQH GDCYLAHQRL AIVDPASGDQ  60
   61 PLFNEDKSLI VTVNGEIYNH EELRKQLPNH KFRTGSDCDV IAHLYEEHGE NFVDMLDGIF 120
  121 SFVLLDTRDN TFIVARDAIG VTSLYIGWGL DGSVWISSEM KGLNDDCEHF ECFPPGHLYS 180
  181 SKDRAFRRWY NPPWFSETIP SAPYDPLALR HAFEKAVIKR LMTDVPFGVL LSGGLDSSLV 240
  241 ASITSRYLAT TKAAEQWGSK LHSFCVGLEG SPDLKAAKEV ADYLGTVHHE FTFTVQDGID 300
  301 AIEDVIYHVE TYDVTTIRAS TPMFLMSRKI KSLGVKWVIS GEGSDEIFGG YLYFHKAPNK 360
  361 EEFHRETCRK IKALYQYDCL RANKSTFAWG LEARVPFLDK EFINVAMNID PENKMIKRDE 420
  421 GRMEKYILRR AFDDEEHPYL PKHILYRQKE QFSDGVGYSW IDGLKEHAAK HVTDKMIFNA 480
  481 ANIFPHNTPT TKEAYYYRMI FERFFPQNSA RLTVPGGASV ACSTAKAVEW DAAWSNNLDP 540
  541 SGRAALGVHL SAYDNQNNLA NKPVEFEKII PMEAPSLGVA IQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle