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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27311615
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVNRDNEE EVKTDDGSPK IKPRPIVRLG IFLIAHSPVF SVVFSAAGVL ALLLLPLLAK  60
   61 NTYISENALM PGSARSMLSN RDVSDGSKLV KDIKNFRLNH EGQGVEVQKL IGKYMSDMGA 120
  121 EVSYQKFHPE GNQFHPLHFF SGPDSYTLLE NVSCASYGVN VAGIIRAPRG DGKESIVLVT 180
  181 PYDFINGGDY EDLSLGIVSS LFSLLSRVTW LSKDIIWLVA DSRYGDYRPV AAWLTEYHSP 240
  241 SFKVSDLLKC DEQNTADNFR RAGTMAAALV LKVDGRSEKF EDTLSIYAEA SNGQMPNLDL 300
  301 INVVNYLAVH RQGFYVKVEK VVSLLSSSWL KIFGEIFKAV GKLAHMLNPD WNFGIPAADY 360
  361 LEGSATLASS LYSQALGIPT GPHGAFRDYQ VDAITLKVSP RFPPDSKTRQ HDFFLRGARL 420
  421 LEGTIRSVNN LLEKFHQSFF LYMLTSPSKF ISVGVYMIAF ALLVAPLPMV AASLYIDGCK 480
  481 SLTNSTHNPT ENFKSWKWLD AAKQVFTLHL LGFIVTLLPY FICQVPGQHS PTNRSIMWGT 540
  541 TSSSLLLITF VTMPGCSPFS SRLHGTNWAI LKSVTISAAF IGLCLMSIIN FATAEIGALL 600
  601 LVPTCLMAQP IKPALRSRRL KSLLGAFCSI VLLTIGFPVM FFAISKGLLG EGLVGLSLGG 660
  661 EFWTWLESLW AWKSATYLYI GMVHLPCWLL CLCILFHPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle