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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66826585, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.38
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEFELNEYS FQEVENLNIN TPNNNNNFGV VGDDFQLNSP DIQNSENQFK YIANELETDS  60
   61 KQYLSNLDAE NNHNENDEDF KLRKYFENSQ RVALGNGQKP KKMGVSVRNL TVVGVGADQS 120
  121 VISDLSTPIF KILNLFKPST WKEKGSTFDI LHDITLFNRD GGMLLVLGRP GSGCSTLLRL 180
  181 ISNQRGSYVE VKGDITYGGI PAKEWKRYQG ESIYTPEEDT HHPTLTVRQT LDFALKCKTI 240
  241 HNRLPDEKKR TYRKRIFDLL LGMFGIVHQA DTIVGNEFIR GLSGGERKRL TITEAMVSSA 300
  301 SITCYDCSTR GLDAASALDY AKSIRIMSDT LDKTTIASFY QASDSIYNLF DNVAVIEKGR 360
  361 LIYFGPGNKA KQYFIDLGFD CEPRKSTPDF LTGVTNPQER IIRQGFEGRV PETFADFEAA 420
  421 WRNSSMYRDM LEEQKEYERK IEIEQPAVDF IQEVKAEKSK TTSKRSIYTT SFLTQVKALI 480
  481 VRNFQIIWGD KLSLGSRYLS VFTQSFVYGS IFYNLETNIN GLFTRGGTLF SVILFNALLC 540
  541 ECEMPLTFGQ RGILQKQHSY AMYRPSALHI AQIVTDIPLT IIQVFLFSIV VYFMFGLQYD 600
  601 AGKFFIFCFT LVGATLATTN LFRMFGNFSP SLYISQNVMN IFIISMITYT GYTIPKPKMH 660
  661 PWFSWFYWCN PFSYAFKALM ANEFGDLSFD CQDTAIPSDP NKIIVYDNSY RICASPGASM 720
  721 GNLTVSGSKY IEESFHFRSD DLTQNVFILY LWWILYIVLN MFAMEYFDWT GGGYSHKVYK 780
  781 KGKAPKMNDV EEEKKQNQIV ANATSKMKDT LKMRGGIFTW QNINYTVPVK GGKRLLLDNV 840
  841 EGWIKPGQMT ALMGSSGAGK TTLLDVLAKR KTMGEVQGKC FLNGKPLEID FERITGYVEQ 900
  901 MDVHNPGLTV REALRFSAKL RQEPSVLLEE KFDYVEHVLE MMEMKHLGDA LIGTLETGVG 960
  961 ISVEERKRLT IGVELVAKPH ILFLDEPTSG LDAQSSYNIV KFIRKLADAG MPLVCTIHQP1020
 1021 SSVLFEHFDR ILLLAKGGKT VYFGDIGEGS KTLTSYFERY GVRPCTESEN PAEYILEATG1080
 1081 AGVHGKSDVN WSETWKQSPE LQEIERELAA LEAQGPSSTE DHGKPREFAT PIWYQTIEVY1140
 1141 KRLNIIWWRD PFYTYGSFIQ ASMAGLIMGF TFWSLKGSSS DMSQRVFFIF ETLILGILLI1200
 1201 FVVLPQFIMQ QEYFKRDFAS KFYSWFPFAI SIVAVEIPIV IISGTFFFFC SFWTAGLYTK1260
 1261 FNEINFYFWF ILILYLLFCV SFGQAVSAIS FNLFLAHTLI PLLIVFLFLF CGVMVIPSSI1320
 1321 PTFWRGWVYH LNPCRYFMEG IVTNVLKHTD VKCTSEDFTH FTNPEAVNGV TCKQYFPISE1380
 1381 PLTGYVEAIN EGDESKCGYC LYNNGEEYYN TLGWSFDNRW RNLAILICFW IFNILMVITF1440
 1441 VYITRKPRR

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