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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB26B_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQVLGCTS RPIRVSLHRC SVITTSDTIR RKNLRFVRNP RLSFSLQSST RNYRLPSINC  60
   61 STVNGAVAET AEYYEGEGDN VSLAEKIRQC IDFLRTILPG GSWWSFSDEV DGRFIAKPVT 120
  121 VWRALSRMWE LVAEDRWVIF AAFSTLIVAA LSEITIPHFL TASIFSAQSG DIAVFHRNVK 180
  181 LLVTLCVTSG ICSGIRGCFF GIANMILVKR MRETLYSTLL FQDISFFDSQ TVGDLTSRLG 240
  241 SDCQQVSRVI GNDLNMIFRN VLQGTGALIY LLILSWPLGL CTLVICCILA AVMFVYGMYQ 300
  301 KKTAKLIQEI TASANEVAQE TYSLMRTVRV YGTEKQEFKR YNHWLQRLAD ISLRQSAAYG 360
  361 IWNWSFNTLY HATQIIAVLV GGLSILAGQI TAEQLTKFLL YSEWLIYATW WVGDNLSSLM 420
  421 QSVGASEKVF QMMDLKPSDQ FISKGTRLQR LTGHIEFVDV SFSYPSRDEV AVVQNVNISV 480
  481 HPGEVVAIVG LSGSGKSTLV NLLLQLYEPT SGQILLDGVP LKELDVKWLR QRIGYVGQEP 540
  541 KLFRTDISSN IKYGCDRNIS QEDIISAAKQ AYAHDFITAL PNGYNTIVDD DLLSGGQKQR 600
  601 IAIARAILRD PRILILDEAT SALDAESEHN VKGVLRSIGN DSATKRSVIV IAHRLSTIQA 660
  661 ADRIVAMDSG RVVEMGSHKE LLSKDGLYAR LTKRQNDAVL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle