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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCNN1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSHSHNGSV GQPLGSGPGF LGWEPVDPEA GRPLQPTQGP GLQMVAKGQP VRLSPGGSRG  60
   61 HPQEQEEEEE EEEEEDKTGS GKPPTVSHRL GHRRALFEKR KRLSDYALIF GMFGIVVMVT 120
  121 ETELSWGVYT KESLCSFALK CLISLSTVIL LGLVILYHAR EIQLFLVDNG ADDWRIAMTW 180
  181 ERVSLISLEL VVCAIHPVPG HYRFTWTARL AFSLVPSAAE ADLDVLLSIP MFLRLYLLAR 240
  241 VMLLHSRIFT DASSRSIGAL NRVTFNTRFV TKTLMTICPG TVLLVFSVSS WIVAAWTVRV 300
  301 CERYHDKQEV TSNFLGAMWL ISITFLSIGY GDMVPHTYCG KGVCLLTGIM GAGCTALVVA 360
  361 VVARKLELTK AEKHVHNFMM DTQLTKRVKN AAANVLRETW LIYKHTRLVK KPDQGRVRKH 420
  421 QRKFLQAIHQ AQKLRSVKIE QGKVNDQANT LAELAKAQSI AYEVVSELQA QQEELEARLA 480
  481 ALESRLDVLG ASLQALPGLI AQAICPLPPP WPGPGHLATA THSPQSHWLP TMGSDCG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle