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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7549210
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFLRNARGFF VLALIQCLIA NTASAYHAGS SAQRNLYKND FLSTQHPTAS FLALGSRSSS  60
   61 RSHTPIFLED ADTTFSTISV QPSSMNVQSV LSRYNRQALE ELKAQPTDKC SEWEPLTNCS 120
  121 TKQALHCLKP LDTSITMLCF NDTCGTWSPW TICNNQLQYR FRPECAGDSI QYRECSGNNY 180
  181 AIFKIEEAKR LAKEKAEREA KEKAEREQRE REKAEREAKE KAEREQRERE KAEREAKEKA 240
  241 EREQREREKA EREAKEKAER EAKEKAEREQ REREKAEREA KEKAEREQRE REKAEREAKE 300
  301 KAEREAKEKA EREQREREKA ELEAKEKAER EQREREKAER EAKEKAEREA KEKAEREQRE 360
  361 REKAELEAKE KAEREQRERE KAEREAKEKA EREQREREKA EREAREKAER EQREREKAER 420
  421 EAREKAEREQ REREKAERLA REKAEREARE KAEREQRERE KAEREAREKA EREQREREKA 480
  481 ERLAREKAER EAREKAEREQ REREKAEREA REKAEREQRE REKAERLARE KAEREAREKA 540
  541 EREQREREKA EREAREKAER EQREREKAER LAREKAEREA REKAEREARE KAEREQRERE 600
  601 KAERLAREKA EREAREKAER EQREREKAER EAKEKAEREQ REREKAEREA KEKAEREQRE 660
  661 REKAEREAKE KAEREQREHE KAEREAREKA EREAREKAER EQREREKAER EAKEKAEREQ 720
  721 REREKAEREA KEKAEREQRE REEAERLARE QAEREQRERE EAERLAREQA EREAREKAER 780
  781 EQREREEAER LAREQADREA REKEEAERLA REQEEREARE KEEAERLARE QKEREAREKE 840
  841 EAERLAQEQA EREAEEARRL AQEQADREAL EKEEAERLAR EQEEREAREK EEAERLAQEQ 900
  901 AEREAREAEE ADRLAREQAE REAEEARRLA QEQEEREARE KEEADRRARE QAEREAEEAR 960
  961 QKEAERLEHE HEEPEAREQQ DGESISPEEA HPTPYTMVRE LNEEASLEDE EKQAHEQKDS1020
 1021 EYDEKQNENN SKYSTMSMVK HASVGLAAVV SAVVGSYVYS KGPSAAAGLA SGVAEQGFDD1080
 1081 GAYGARKEDD IETKIQLEEN FWAEGDDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle