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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8131846, gi|8...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNSENHHPH HHHHHSDTEV IGNDRASYSG PLSGPLNKRG GKKCARFNIP ESTDIGTSAG  60
   61 AGAKSNDDAY VEITLDVRED SVAVHSVKTA GGADVEDPEL ALLAKGLEKK STLGASLVRN 120
  121 ASSRIRQVSQ ELKRLASLNK RPIPTGRFDR NKSAAAHALK GLKFISKTDG GAGWAAVEKR 180
  181 FDEITASTTG LLPRAKFGEC IGMNKESKEF AGELYDALAR RRNITTDSIN KAQLKEFWDQ 240
  241 VADQSFDTRL QTFFDMVDKD ADGRITEEEV REIIGLSASA NRLSTIQKQS DEYAAMIMEE 300
  301 LDPNNLGYIM IENLEMLLLQ APNQTVQRGG ESRNLSQMLS QKLKHTQEPN PLVRWYKSFK 360
  361 YFLLDSWQRV WVLLLWIGIM AGLFTWKYIQ YKQKAAYGVM GPCVCLAKGA AETIKLNMAI 420
  421 ILLPVCRNTI TWLRNKTRLG SAVPFDDNLN FHKVIAVAVA LGVAIHGLAH LTCDFPRLLN 480
  481 ASEGAYEPMI YYFGEQPESY WWFVKGVEGV TGIIMVILMA IAFTLATPWF RRGRVSFPKP 540
  541 FHKLTGFNAF WYSHHLFIIV YTLLIVHGEK LYITKTWYKR TTWMYLTVPL ALYAGERLLR 600
  601 AFRSSIKAVK ILKVAVYPGN VLALHMSKPQ GYKYKSGQYM FVNCAAVSPF EWHPFSITSA 660
  661 PGDDYLSVHI RTLGDWTRQL KTVFSEVCQP PPNGKSGLLR ADYLQGENNP NFPRVLIDGP 720
  721 YGAPAQDYKQ YEVVLLVGLG IGATPMISIV KDIVNNMKAM DEEENSLENG HGMSNAAQNA 780
  781 SPNMAQKRGK SGSASGRNSF NTRRAYFYWV TREQGSFDWF KGIMNEAAEM DHKGVIEMHN 840
  841 YCTSVYEEGD ARSALITMLQ SLHHAKNGVD IVSGTRVKSH FAKPNWRNVY KRIALNHPEA 900
  901 KVGVFYCGAP ALTKELKQHA LDFSHKTSTK FDFHKENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle