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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125777326, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKPPSAAA LASVGKRLGL HSKAYNGLIG VCDKFVPPKM RPLWMHPAGP KTIFFWAPLV  60
   61 KWGLVIAGLS DLTRPADTIS PNGCLALGAT NLIWTRYALV IIPKNYSLFA VNLFVSLTQL 120
  121 FQLGRAYNYK WEQTKLEKTS IISMAFSQSD MLQREVYLFE RLDSGRSNER LKYLKCIVFI 180
  181 RPTKQNIQLL ANELRNPKYS AYYIYFSNII PRTDIKYLAE CDESESVREV KELYADYLSV 240
  241 NPNLFSLNIP NCMANLNWLP DALTRSMQGI TAVLLSLKLN PVIRYRAGSQ AAQLLAKMIY 300
  301 EQITKDSTLF DFRSNMDGSA PPLLLVLDRR DDPVTPLLHQ WTYQAMVHEL LQIKNNRVDL 360
  361 SDRANVPKDF KELVLSGDQD DFYGNNMYAN YGEIGSTIKA LMEEFQRKAN DQKKVESIAD 420
  421 MKNFIESYPQ FKKMSGTVQK HLCVIGELSG LSNKRNLFEL SELEQEIACK AEHSAQLQRI 480
  481 KKLIADERVA IDDALKLVAL YALRYERHAN CDTSSLLQII KTRGGRPQIV PALIEYAGNH 540
  541 VRQGDLFNMV RITDAVKLTR NLIKGLKGVE NVFTQHTPLL KETLEDIFKG RELDPVFPAI 600
  601 NSELVPFRRP PQEVVVFIIG GATYEEALAV HQLNNSGYKI ILGGTTIHNS QSFINEVLSA 660
  661 TNGIQFKHTK SMIKIIIIIM SSTYFNEIWH QSQHECELLS TIDYERQHQD VETTVATMNA 720
  721 AVGSVAADAD AKALLQSSLY EFYLRYICLS NRLEDVYDNM IQPQKRQLVR KLLDACLGRV 780
  781 IELKHDLVNI DLMEFSYNDA VIERLRLTPM ESELRVPRYF LRERQQELEF RKRSMQEILV 840
  841 KLGWLEEHEL EETVTTEIEA IRMLQMHERA RQGRLRAHFM KEIRILKEKG KSEERTEKER 900
  901 SDSGLLAAMK IQKMWRGHTA RRITRRRKME EMILIGMLPP PAAVLKERAE KLDKLQHNDK 960
  961 RYEAQDVYAE QFETRQRVVQ EEIRQKHGAS MKEDIADEIR AWVKDCYEKT GKLPDFPTED1020
 1021 QGGSLHIFSR PGTESEHSRS SARSSKESRK TKDKSKSPAR SGDLNVNENQ EEDVSFQPAP1080
 1081 SICLPDIRTE IDLFNDTWRD KDETGVLSQA AYEDMIYSDK YQEVELEFRR AVDDVMRQEI1140
 1141 ELLQTAVGKK IKKSSKKTRR SGKKNKKKKE KDLTPDRTTE SLYEELVTNG IIRKYPELKL1200
 1201 KQFLGDKALT ARNGTNPSPG DIRQILTEYC ILPLGSEAIH NCTPLIRSIL LAGPRGSGKK1260
 1261 ALLHAICTEV GAVLFDLTPA NIVGKYPGKS GLIMLIHLVV KVSRLLQPAV IYMGDAERPF1320
 1321 MKKIPKTDRT DPKRLKKDLP KLIKNIAPED RVIFVGTSNL PWEADQKMLQ SVYNRFIYIP1380
 1381 RPDYGAMSHA WKTLLHEYSG GVSNLDTSAM AKISDGYTIG AIDACLKEVM TCKRKLQLRT1440
 1441 QPLTNAELIN VLCTRDPVYR EEEEAFESWW SKTPLGRRRQ RFLELEEERL IEEQAQAAKQ1500
 1501 GNGNKKKGLN 

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