YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54637511\|gb\|E...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLDERIGF IGGGNMAFAI GSGLVRCAIV KPSQVLVSGP HIENLSRWRE LGAVTTDDNC  60
   61 EVLEHTDVVF ICVKPHILGQ CASQLKYKHV PSAKDASKLI VSVLAGTSLK TLEEKFEFIE 120
  121 SSGPKVIRTM PNTSMQVGEG CTVYTGNARV THQDLEKVHI MLNALGLAQQ VPEQMIDAVT 180
  181 GLAGCGPAFV YTIIEALADG GVKQGVPRAM ALQFAAQTLL GAAKTVLITG KHPAVLRDEV 240
  241 CSPGGSTIVG VHELEKGNLR ATLINAVEKA TQRSTELGKK

Type	Start	End	Confidence
Cytoplasmic	1	7	0.66
Transmembrane Helix	8	30	0.66
Non-Cytoplasmic	31	280	0.93