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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125772957, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWILLFMVA LGLGLAAAST SSSYSFYRLP TAVRPQKYHL KILTHLDNPE ELRFAGTVRI  60
   61 LVEALQNTKN ITLHSKNLTI DESQITLRQI SGEEKKDNCV SSTEVNQDHD FYVLNTCQEL 120
  121 LAGNVYELSL PFAAELNKQL EGYYRSSYKD TDTNKTRWLS ITQFEPASAR AAFPCFDEPG 180
  181 YKAPFVVTLG FHKQYTGLSN MPAKETKPHE SLADYIWVEF DESVPMSTYL VAYSVNDFAN 240
  241 KPSTLPNSPL FRTWARPNAI DQCNYAAEFG PKVLQYYEQF FGIKFPLPKI DQIAIPDFNA 300
  301 GAMENWGLVT YREIALLFSP EHTSLADKQR LANVVAHELA HQWFGNLVTM KWWTDLWLNE 360
  361 GFATYIASLG VENINPEWRS LEQDSLSNLL TIFRKDALES SHPISRPIEV VSDIAESFDQ 420
  421 ISYQKGSSVL RMMHMFLGEE SFRAGLQSYL QMYSYKNAEQ DNLWESLTQA AHKFRALPKS 480
  481 YDIKSIMDSW TLQTGYPVIN VTRDYGGKSA KLSQERYLLN TQISREHRGG CWWVPLSYTT 540
  541 QGEQDFNNTA PKAWMECGKT GESLSKTIQD LPGADQWVIF NTQLSTLYKV NYDSHNWKLL 600
  601 IETLTEGDFE RIHVINRAQL IDDALYLAWT GEQDYEIAMR LIEYLQRERE YLPWKSAFEN 660
  661 LKRVSRILRQ TPEFEFFKRY IKKLVTPIYL HLNGLNDTFS GIQQQDQILL KTMVANWACQ 720
  721 YQVADCVPLA LQYYRNWRSE ADPDEKNPVP LNLRNTVYCT SIKYGTDADW EFLWTRYKKS 780
  781 NVAAEKRTIL TSLGCSREVW VLQRYLEMAY DPNQAIRKQD SMWAFQAIAF NEVGFLLAKK 840
  841 YFMDNVNFLY KFYYPITKDM GRLLTPFSEQ VFTQSDFNEF RNFVLLSRDS LKGLEQAIQQ 900
  901 TLETMLTNVQ WKERNYHQMS RSIQKLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle