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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54637225, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PALAQRPLLA NHTFNALSNY NNNNWGPGGK QLRNGRVHEQ PLPLPQPQPT VTGIYDDYEG  60
   61 EAGSRPPPAG GRRETRRRQN LARRGMESLR KELMKPSVGG PGGGLSGSSA GYPSYSGTSS 120
  121 IGRIDGLGLG MGSADRYGEQ LRQPSGAAAM TAGPVVGPYS TRFPPLYAGV DEQQPKRMYS 180
  181 RKNSISELYK LKKSLNQADE PAGGVTHGNF EGDPVVSPQG VPVDLIQEIK DRIRDTEPNA 240
  241 NTYSTHTEST PSSEYEYELG VKCNFETPCS WSWVDYPDGF QVMTGTELAK RNMTGLLPGP 300
  301 VADSIDDANG HFLYARVQPS TKPLNLTSPE FSTTMEKCFL EVYMHQSDMS HGLSRVVVEP 360
  361 LHTQESSWVP AEIQGDNFRT WTRKVYRLGR ISRDFRIVFE IVPDLKAGQK GHVALDNLRM 420
  421 VNCFPEGTKS EKCSTSQVKC TNNRVPVCIH LPRVCDITRD CDEAEDEHQS CDKIPYGGRC 480
  481 DFEEDWCGWR DSGKTTLTWS RHTGSSPTHD TGPDGDHTLQ HLLNNTSGYY MLVNMNQHMN 540
  541 DTEKNSIIGF ASNAIMLSKT FNPPPSVHGN PDSPYRNSCV VRFFIHQFGK NPGSINLSVV 600
  601 EMKEKENITT TLWWSTKNQG SDWLRAEYVL PNITSKYYLQ FEARMGMRIY SDVAVDDFSL 660
  661 SPECFGLNIP EEHLNGYNYW DVRQNLKSPT YRDFEYTNYL ELTSCDTRGM IGPTQSQCES 720
  721 AYKEQNKTHI LREVHVVEDQ SSYKGMQKWK VPNEGHYTII AKGASGGLGS GGVGSSRGSV 780
  781 AVAVLELHKN EELYFLIGQQ GENACIKSMG ALKEAGCGTD HDLDLAQYSF RSKQDMVKNI 840
  841 YIENGAGGGG GGSFVFLLNQ AKNEAVPLLV AGGGGGLGIG QYIDEDFQHG QKAKPLQAPE 900
  901 SGQINGEPLN KKTAGPGGGW RAKEDQALSP TNGAALLQGG RGGHSCYVEL ADNGTTVHRH 960
  961 GQGGYVYLNE SNGEGGSSYI SASRSLREIG DVYAGASSGP GSVIIIPAIE GCGCDYRCVA1020
 1021 MDEFRSKVRC ICPDGWSLKK DNNTACEIRE EAGKSSFQHL VSILIFSLAV LFFCIAALIF1080
 1081 MLYNRYQRKK QTKKRHKMLV EQDLQLTRLR HNIDDSNLNN FNPNYGCDAI LNGHIDVNSL1140
 1141 PQVGRDSLQL VNALGKGAFG EVYMALYRHR DGDAVEMGVA VKTLREDPKR EKEEDFLKEA1200
 1201 AIMAKFNHPN MVHLIGVCFD RQPYYIVLEL LAGGDLQKFL RENRNTPERP SLLTMKDLLF1260
 1261 CALDVAKGCR YMESKRFIHR DIAARNCLLS SKGPGRVVKI ADFGMSRDIY RSDYYRKGGK1320
 1321 AMLPIKWMPP EAFLDGIFTS KTDVWSFGIL LWEVFSLGRS PYPGQHNTQV MELVVRGGRL1380
 1381 GTPTECPVSI YKIMADCWNP TPEDRPTFTS LMEHLTSCSQ DPSIMNAPLP NILGSTSSDR1440
 1441 DDTIIRPPNG EEFCLAVPDY LVPLPSHLAQ HLPSGSAYIP PQRKQASASA CTPPAVSSPA1500
 1501 TPHPKPVVLH DQQLETSFIL PNSKNAAEGV VDSQTHDHEG KLISLDTPQP TPTSITPPQC1560
 1561 FASQLDGITL DPSTLAKSLP NGLPPGKQSY ANVQVKGEPE PKAMTNGNGN GAVVNGESPT1620
 1621 AAGAAGDRDP PFTIQGYAER YKDNNNHSEI SC

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