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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125811035, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTALILPLL ALVAVAQAVS YAEVIQEEWH TFKLEHRKNY QDETEERFRL KIFNENKHKI  60
   61 AKHNQLWATG AVSFKMAVNK YADMLHHEFY STMNGFNYTL HKQLRNADES FKGVTFISPE 120
  121 HVTLPKQVDW RTKGAVTDVK DQGHCGSCWA FSSTGALEGQ HYRKSGVLVS LSEQNLVDCS 180
  181 TKYGNNGCNG GLMDNAFRYI KDNGGIDTEK SYPYEAIDDS CHFNKGTIGA TDRGFVDIPQ 240
  241 GNEKKMAEAV ATIGPVAVAI DASHESFQFY SEGVYNEPAC DAQNLDHGVL VVGFGTDESG 300
  301 QDYWLVKNSW GTTWGDKGFI KMLRNKENQC GIASASSYPL TKVGTGEGFC PPIAEVEGRG 360
  361 VSLTQPISSV CIEIVPRQEY AKVRGAGRRK LNQDIFTELR NERLSLKEAT GEVDSHRIHD 420
  421 QQGDHIDRFL KGVVKGKKPY IDRKKAVTFH LVHRSQHDPL VTDENAPQRV LLEAAARQRQ 480
  481 SQTKSQDEAP VDPAKRQEEQ KKFGIHFDDD YDYLQHMKKR ENDVVWEYME NPNHAKKRQE 540
  541 DDKPSTAPKL VLPSSVFASE FEETEGMLNK AAPQSLRLDW DPDVVAALDS DCENEELEDD 600
  601 FVMQAMGDGD EDDEDDWTDE EEGDDEDMDF DSDNMNENED EDELMDRLAP LMRERRFDDE 660
  661 EVKSRFTEYS MSSSVIRRNE QLSLLDDRFE KFYASYDDPE LGDLALEDIE GNWHQKHPVV 720
  721 MQCFQEFKKK NKTIDYNKDW DRERIEKYRH VVEGEEDPTE ELVEYEVDDP KQKKWDCESI 780
  781 LSTYSNIYNH PKLIDEPRRS RRSSASSNPA PIQIDPKTGL PANVLRGGVD GQLTAKALAN 840
  841 LGDDSNAATG PKSLCAKSVL STLSVLSIRP KDESAEEKKE RKRLLKDYRN ERRIEKKANT 900
  901 EAFREEKKRQ THVKINQRSN QQGATIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle