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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7798835
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLSLVPMA LAAVATAKTV EYDFHVNWTT ANPDGLYERK VIGINGQWPL PRIEVDKGDR  60
   61 LVVNMYNDMP DRNASIHFHG MYQNGTNYMD GPVGVTQCPV PPGGKFTYNF TVDQNGTYWY 120
  121 HSHVDGQYPD GYRAPFIVHD KNFPYDYDEE LVLTMSDWYH DLIDYLNKEE FLTLYNPTGA 180
  181 EPVPQAMLFN DTQKLSVSVK PNTTYLVHLM NIGALGAQYF YIEDHNVTVV EIDGVYTEPA 240
  241 ETDILYLAVA QRYTFLLKTK DTTDKNYPMV SIFDENLFDV IPSDLGMNMT NWLEYNSDAD 300
  301 HPEADIPWES SVDIEYFDDM DLVPYDHKPL YTNVSKRIEL EVVMTNLDNG VNYAFFNNIT 360
  361 YTAPKVPTLM TALSAGDLVT NELVYGEYTH TVVVNHLDVV EIVVNNNDAG FHPFHLHGHE 420
  421 FQVVERSPEY EGFVPYNPDN HTDSDFAEYP MRRDTAWVPP NGNMVLRFVA DNPGAWFFHC 480
  481 HIDWHLTQGL AMVFVEAPEK LKDMTLPQSH KDTCDAVGMP WKGNAAANDD DFLDLTGQNA 540
  541 QAPDLPAGFT ARGIVALVFS CISAFLGMGM ITWYGLSDIS NTERKVLERE GVISEGEQVD 600
  601 PIDPSTVAHP HHHEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle