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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18073449
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYSLVSFIT AATLLLSSVM ADDLPAIEIK GNKFFFSNNG SQFYMKGIAY QADTANVTGG  60
   61 ATINDPLADW DTCSRDIPYL QQLATNVIRV YAVNTSLDHS RCMNALNDAG IYVIADLSSP 120
  121 KVSVNRKSPS WDLEIFDRYK SVVDMFANYS NVLGFFAGNE VTNDATNTDA SAFVKAAIRD 180
  181 TKSYIKEKGY RGIPVGYSSN DDADTRVDIA DYFACGDDAE RADFYGINMY EWCGNSTFQN 240
  241 SGYADRTKEF ANLSIPLFFS EYGCNEVQPR EFTEVQALYG PDMTDVWSGG IVYMYFQEAN 300
  301 NYGLVSIDGS SVKTLEDFNY YSKEIHSISP SSVNSKTYTP TATSLACPST NQYWKAATNL 360
  361 PPTPQLDLCE CMDAANSCIV QDDVDEDDYQ DLFSYLCGKI DCGGITGNGT TGKYGSYSFC 420
  421 SPKEKLNFVL NLYYNAQGGS KSNCDFSGSA TLRSGTTQAG CASALKEIGS VGTNSATDSV 480
  481 TFSGGSTGTS KASATGSNSS KSGSSKSGSS TSSSAKSSSS GKSNKKSNSS SSVQVGLYQL 540
  541 LFSAFITLGA VAGAGFALI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle