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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK29_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHVRVIFFF ACFLTLAPFH AFAQVDSYEF DPDFNCVDRG NFTANSTFAG NLNRLVSSLS  60
   61 SLKSQAYGFY NLSSGDSSGE RAYAIGLCRR EVKRDDCVSC IQTAARNLTK QCPLTKQAVV 120
  121 WYTHCMFRYS NRTIYGRKET NPTKAFIAGE EISANRDDFE RLQRGLLDRL KGIAAAGGPN 180
  181 RKYAQGNGSA SAGYRRFYGT VQCTPDLSEQ DCNDCLVFGF ENIPSCCDAE IGLRWFSPSC 240
  241 NFRFETWRFY EFDADLEPDP PAIQPADSPQ SAARTERTGK GKGGSKVIIA IVIPILLVAL 300
  301 LAICLCLVLK WRKNKSGYKN KVLGKSPLSG SIAEDEFSNT ESLLVHFETL KTATDNFSSE 360
  361 NELGRGGFGS VYKGVFPQGQ EIAVKRLSGN SGQGDNEFKN EILLLAKLQH RNLVRLIGFC 420
  421 IQGEERLLVY EFIKNASLDQ FIFDTEKRQL LDWVVRYKMI GGIARGLLYL HEDSRFRIIH 480
  481 RDLKASNILL DQEMNPKIAD FGLAKLFDSG QTMTHRFTSR IAGTYGYMAP EYAMHGQFSV 540
  541 KTDVFSFGVL VIEIITGKRN NNGGSNGDED AEDLLSWVWR SWREDTILSV IDPSLTAGSR 600
  601 NEILRCIHIG LLCVQESAAT RPTMATVSLM LNSYSFTLPT PLRPAFVLES VVIPSNVSSS 660
  661 TEGLQMSSND VTVSEFSPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle