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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31580853
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKGSITLE EIKNETVDLE RIPVEEVFEQ LKCTREGLSS EEGANRLQIF GPNKLEEKKE  60
   61 SKILKFLGFM WNPLSWVMEA AAIMAIALAN GDGKPPDWQD FVGIVCLLLI NSTISFIEEN 120
  121 NAGNAAAALM AGLTPKTKVL RDGQWSEQEA AILVPGDIIS IKLGDIIPAD ARLLEGDPLK 180
  181 VDQSALTGES LPVNKNPGDE VFSGSTCKQG EIEAVVIATG VHTFFGKAAH LVDSTNQVGH 240
  241 FQKVLTAIGN FCICSIAVGM LAEIIVMYPI QHRKYRDGID NLLVLLIGGI PIAMPTVLSV 300
  301 TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDKNL IEVFAKGVDK 360
  361 EHVLLLAARA SRTENQDAID AAVVGTLADP KEARAGIREV HFFPFNPVDK RTALTYIDSD 420
  421 GNWHRASKGA PEQIMTLCNL RDDAKKKIHA IIDKFAERGL RSLAVARQEV PEKSKDSAGG 480
  481 PWQFVGLLSL FDPPRHDSAE TIRRALNLGV NVKMITGDQL AIAKETGRRL GMGTNMYPSA 540
  541 SLLGQDKDAS IAALPIEELI EKADGFAGVF PEHKYEIVKK LQERKHICGM TGDGVNDAPA 600
  601 LKKADIGIAV ADATDAARSA SDIVLTEPGL SVIISAVLTS RAIFQRMKNY TIYAVSITIR 660
  661 IVFGFMFIAL IWKFDFSPFM VLIIAILNDG TIMTISKDRV KPSPMPDSWK LKEIFATGVV 720
  721 LGGYLALMTV IFFWAMKETT FFSDKFGVRS LHDSPDEMIA ALYLQVSIVS QALIFVTRSR 780
  781 SWSYVERPGL LLMSAFVIAQ LIATLIAVYA NWGFARIKGI GWGWAGVIWL YSIVFYVPLD 840
  841 IMKFAIRYIL SGKAWLNLLE NKTAFTTKKD YGKEEREAQW ALAQRTLHGL QPPETSGIFN 900
  901 EKSSYRELSE IAEQAKRRAE VARLRELHTL KGHVESVVKL KGLDIDTIQQ HYTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle