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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14699987
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSPLTPSY DLENAAAAVY TPLPEQPHSA GVEIRDRKPF KIISGIILSS LFLLALILVA  60
   61 VNYQTPPSHA PPLSSGGDNS QPAAVIPPSR GVSQGVSEKA FRGGSGAGNG VSFAWSNLML 120
  121 SWQRTSYHFQ PVKNWMNDPN GPLYYKGWYH LFYQYNPDSA VWGNITWGHA VSTDLINWLH 180
  181 LPFAMVPDQW YDVNGVWTGS ATILPDGRIV MLYTGDTDDY VQVQNLAFPA NLSDPLLVDW 240
  241 VKYPNNPVIY PPPGIGVKDF RDPTTAWTAG SQNGQWLVTI GSKVGKTGIS LVYETTNFTT 300
  301 FKLLDGVLHA VPGTGMWECV DLYPVSTTGE NGLDTSVNGL DVKHVLKASL DDDKHDYYAL 360
  361 GTYDPAKNKW TPDNTDLDVG IGLRLDYGKY YASKTFYDQN KQRRILWGWI GETDLEAVDL 420
  421 MKGWASLQAI PRTIVFDKKT GTNVLQWPVE EVESLRSGDP ITAEANLEPG SVVPIHVSEG 480
  481 TQLDITASFE VDETLLETTS ESHDSGYDCS NSGGAVTRGS LGPFGLLVVA DEKLSELTPV 540
  541 YFYVAKGADG KAKTHFCADQ TRSSMASGVE KEVYGSSVPV LDGENYSARI LIDHSIVESF 600
  601 AQGGRTVITS RIYPTKAIFG AAKVFLFNNA TKATVTASVK MWQMNSADIK RFPLDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle