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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18152891
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYAGTKGDG IIRTASGHET YAPDGLGTPQ REYEEEIAPS EDPSRATSER YAPITGHLYR  60
   61 RNSSDTEKGS DEDFTMATRS KSFTENMDTD DKDKLNRILT SLSQHQTRSS TLRRNDTISG 120
  121 LKEDDPVFDP SHKDFDLYKY LRLFMRDLQA DGRETKKAGI VFRNLSVSGS GAALQLQSTV 180
  181 SDFVLAPFRL RELFSSSKSH KQIIDKFDGV LKSGELLIVL GRPGSGCSTF LKTLCGELTG 240
  241 LTVDKGSVIH YNGIPQKKMI KEFKGEVVYN QEVDKHFPHL TVGQTLEFAA AVRTPSNRLH 300
  301 GESRTEFSSQ VAKVVMAVFG LSHTYNTKVG NDFVRGVSGG ERKRVSIAEM AVAGAPLAAW 360
  361 DNSTRGLDSA TALKFVEATR ISADLTGSSH AIAIYQASQA IYDRFDKAVV LYSGRQIYFG 420
  421 PASKAKQFFE EQGWYCPKRQ TTGDFLTSIT NPSERRPREG MEKQVPRTPE DFEKYWRNSE 480
  481 MYQSLQKEIE DHETEFPIGG ETLGKLQQQK RNAQASHTRP KSPYMISVPM QIKLCTKRAY 540
  541 QRIWNDMSST LTMFISQIIM SLIIGSVFYG TPNATAGFFS KGAVLFFAVL LNALVAMTEI 600
  601 NSLYDQRPIV EKHNSYAFYH PATEAIAGIV SDIPVKFLLA VGFNVIFYFL AGLRREPSQF 660
  661 FLYFLVSYVI MFVMAAVFRT MAAVTKTISQ AMSLAGVLVL ALVIYTGFVI PVSYMKPWFG 720
  721 WIHYINPIYY AFEILIANEF HGRDFTCSAI IPAYTPLQGD SWICSIVGAV PGRRTVSGDD 780
  781 FIMQMYQYSY SHVWRNFGIL LGFLCGFMCI YFVGVEVNSS TSSAAEFLIF RRGYVPAYMQ 840
  841 DDPKHAGNDE EKMADGTTDA KEDGGDVSAI PPQKDIFTWR DIVYDIQIKG EDRRLLDHVT 900
  901 GWVRPGTLTA LMGVSGAGKT TLLDVLAQRT TMGVITGDML VNGKPLDASF QRKTGYVQQQ 960
  961 DLHLETATVR ESLRFSAELR QPKTVTLQEK FDYVEDVIKM LNMEDFAEAI VGSPGEGLNV1020
 1021 EQRKLLTIGV ELAAKPKLLL FLDEPTSGLD SQSAWAICAF LRKLADAGQA VLCTIHQPSA1080
 1081 ILFQEFDRLL FLAKGGKTVY FGPVGKNSET LIDYYESNGA RKCGEEENPA EYMLEIVNKG1140
 1141 SSGQGQDWHE VWKGSKEREA VNEELKQIHK EKEGEAIAGA NEEGAQDEFA MPFTAQVKAV1200
 1201 TVRVFQQYWR MPSYVFAKWA LGIASGLFIG FSFFQANTTQ QGVQNVLFSA FMIATIFSSL1260
 1261 VQQIMPLFVN QRSLYEVRER PSKAYSWKAF MIANIVVEIP YNIFLGVPVF ACYLYAIAGI1320
 1321 ISSVRQVLIL LLMIQFFVYA GTFAAMCIAA LPDAETAAAV VTLLFATSLT FNGVMQSPQA1380
 1381 LPGFWIFMYR ISPFTYWISS LVSTMLHGRR IECSSSETSR FSPPAGQTCQ QYLADYLQTA1440
 1441 PGTLQNPNDT TNCRYCSLST ADQLLAGSNV KYDTRWRDFG IVWSYVIFNI FVAVLTYYLF1500
 1501 RVKKWNKGTG KSDGAKKAGF LGKILKKGAN KGNDAKTEKG EQQANQHQRA I

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