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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CKX5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNREMTSSFL LLTFAICKLI IAVGLNVGPS ELLRIGAIDV DGHFTVHPSD LASVSSDFGM  60
   61 LKSPEEPLAV LHPSSAEDVA RLVRTAYGSA TAFPVSARGH GHSINGQAAA GRNGVVVEMN 120
  121 HGVTGTPKPL VRPDEMYVDV WGGELWVDVL KKTLEHGLAP KSWTDYLYLT VGGTLSNAGI 180
  181 SGQAFHHGPQ ISNVLELDVV TGKGEVMRCS EEENTRLFHG VLGGLGQFGI ITRARISLEP 240
  241 APQRVRWIRV LYSSFKVFTE DQEYLISMHG QLKFDYVEGF VIVDEGLVNN WRSSFFSPRN 300
  301 PVKISSVSSN GSVLYCLEIT KNYHDSDSEI VDQEVEILMK KLNFIPTSVF TTDLQYVDFL 360
  361 DRVHKAELKL RSKNLWEVPH PWLNLFVPKS RISDFDKGVF KGILGNKTSG PILIYPMNKD 420
  421 KWDERSSAVT PDEEVFYLVA LLRSALTDGE ETQKLEYLKD QNRRILEFCE QAKINVKQYL 480
  481 PHHATQEEWV AHFGDKWDRF RSLKAEFDPR HILATGQRIF QNPSLSLFPP SSSSSSAASW 540
  541 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle