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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ORTHL_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVNQLPCD CVSTAEESLT SGTCITPTHV TSLSSPLDRS GDVDPLPVSD ESGGSKADES  60
   61 MTDADETKKR KRILSGDCEA DENNKSDGEI ASLNDGVDAF TAICEDLNCS LCNQLPDRPV 120
  121 TILCGHNFCL KCFDKWIDQG NQICATCRST IPDKMAANPR VNSSLVSVIR YVKVAKTAGV 180
  181 GTANFFPFTS NQDGPENAFR TKRAKIGEEN AARIYVTVPF DHFGPIPAEH DPVRNQGVLV 240
  241 GESWENRVEC RQWGVHLPHV SCIAGQEDYG AQSVVISGGY KDDEDHGEWF LYTGRSRGRH 300
  301 FANEDQEFED LNEALRVSCE MGYPVRVVRS YKDRYSAYAP KEGVRYDGVY RIEKCWRKAR 360
  361 FPDSFKVCRY LFVRCDNEPA PWNSDESGDR PRPLPNIPEL ETASDLFERK ESPSWDFDEA 420
  421 EGRWRWMKPP PANHEQRERM KMAMTCLLLF VLIILVGSSS ILYQY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle