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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TOC64_PEA
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSMASPSSQ IWVILGLGLA GIYVLTRKLT QAVKEDFGAF LLKLKLLPPP PPAPPKAPHP  60
   61 LSSLNFAISD IFDIEGHVST FGHPEWARTH EPASSTASAV SALVESGATC IGTTVVDELA 120
  121 YGISGENKHF GTPTNPAVPN RVPGGSSSGA AVAVAANFVD FSLGVDTSGG VRVPAGFCGI 180
  181 LGFRPSHGAV SHVGIIPVST SLDTVGWFAK DPDVLRRVGH ILLQAPFVMQ RNPRQIIIAD 240
  241 DCFQHLNVPL DRTSQVVIKA TEKLFGKQVL KHINFEDYIS SKVSSLKACS IQKSNGVLKS 300
  301 SSLKLLANVM QSLQRHEFEH THSEWMSIVK PDLHPAVSAQ LHEKFEVSEL EIENSKSVRS 360
  361 ELRVAVNSLL KDEGVLVIPT VADPPPKLGG KEFLSHDYQS RALSLLSIAS ISGCCQVTVP 420
  421 LGFFDKNPVS VSLIARHGGD RFLLDTLKTM YTVLQEQADI AAPSKSSKSV VSKEQSAEIS 480
  481 KEKGNQAYKD KQWQKAIGFY TEAIKLCGNN ATYYSNRAQA YLELGSYLQA EEDCTTAISF 540
  541 DKKNVKAYFR RGTAREMLGY YKEAIDDFKY ALVLEPTNKR AASSAERLRK LFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle