YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17861996
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSVYLNSD LSLREAAKRA LGPELNLTNF SVVPFSICHH TENIDTNQLD YIPSRPEEPT  60
   61 HKSSFGEDYM ITFVWPIVII VAMLVAASII ACCLHWCRQR SGKMELGDEE ERKSFRAKGI 120
  121 PVIFQDEYEE KPEIGNKSPV ILKDEKPPLL PPSYNTSNMN GDNDVDDYVP PPSVVVGGRE 180
  181 VRGKSPATPS YRKPPPYVSP

Type	Start	End	Confidence
Non-Cytoplasmic	1	72	0.73
Transmembrane Helix	73	96	0.92
Cytoplasmic	97	200	0.91