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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17863018
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLARMAIDT ERKYGKISDD IYLMYIRAAG LPIITIFFIT ALIWQCLRVY TDIWLQQWSD  60
   61 VHGRVASKGH VVLHPSEQDH EVTYYFRMYA AISCVCIIMA LVSTPAGQYA GCNARRNLHD 120
  121 KLLQTILHKT LHFFQVTPLG RIVNRFSNDM AVIDKKIAAT GQRLLQFTLL CLSAILINVT 180
  181 ITPWILVLTL PICGAYYLIQ KFYRCSAREL QRIENATNSP VISHLSETIQ GVTTIRAFNQ 240
  241 QTRFTEILFK RLEANTIAYA LLNTSHRWLG VSLDYLGGCI VFVATVTALT AASVSCRRHY 300
  301 EATTSPSASA SPSPFETYAV TKSPSELRPS PSLVGLAINY TLLVPIYLNW VVKLLADMEM 360
  361 YAGSVERIAH YAQGQDADAD TDADVDADLD HEPSSNEDVS AEVDRSSQSD AGDKVYPGAT 420
  421 TAAGDVDEDG DQQRNGGARG GGGGCGDRQG HENGSEAKAD KLNAGNATGD GNHLNIHHPP 480
  481 ATAGDKVEQV TTKTSVIKDK QLPLQQDDKD KKVVLPNEPA RKLERYQSVP ISWPQRGDIH 540
  541 FDNVSLRYEG QKQNVISNLT LKIPAGQRIG ICGRTGSGKS SLGLSLFGVL QTTRGHIYID 600
  601 DVDIQRIRPD ELRTRLSIIP QDVHLFNATI RENLDPHGYF QDLQLWNCLE LAQLKEFVNG 660
  661 HLPLGLDTMI CDGGLNLSAG HRQLLCLARA ILRGSVCLVL DEATSVLDSS TESALLKAAD 720
  721 LAFRGRTIIT IAHRLTTILD YDRLIVLDQG RIVEDGNPRE LQQLEGSVFR GLLEKGASKW 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle