YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1587054, gi\|9...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTVVCLVV SFFLLHYAEH SDACLEVIEK ALGLQPCNEG GRNEHREPHR GGPGPVRSTR  60
   61 RRGRIPRRRE TPRPIHHNTR ERRHHTKTRK PRKPVPCITK RTEPPPVTDF TTRKSNPPCT 120
  121 CTESTTRKTN PTCTCTESTT KKTNPTCTCT ESTTKKTNPT CTCTESTTPL TEPPVTDITT 180
  181 QKSNPPCTCT ESTTRKTNPT CTCTESTTQK TNPTCTCTES TTKKTNPTCT CTESTTPLTE 240
  241 PPVTDITTQK SNPPCTCTES TTRKTNPTCT CTESTTRKTN PTCTCTESTT KKTNPTCTCT 300
  301 ESTTPLTEPP VTDITTQKSN PPCTCTESTT QKIKSTSTTQ GTEPPSTQKT LPPNPPSTKN 360
  361 TEPPNSTPPP EKTTRKPCGC SSSHPSGWNL AVL

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	393	0.99