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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17646113
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCNCFDPQW PADELLMKYQ YLSDFFIALA YFSIPVELVY FVQKSAVFPY RWVLVQFGAF  60
   61 IVLCGATHLI NLWTSTAHTR TLAIVMTTAK VLTAVVSCAT ALMLVHIIPD LLSVKTRELF 120
  121 LKNKAAELDR EMGLIRTQEE TGRYVRMLTH EIRSTLDRHT ILKTTLVELG RALGLEECAL 180
  181 WMPTRTGLEL QLSYTLRHQN PVGFTVPIQL PVINQVFSTN RAVKISPNSP VARLRPAGKY 240
  241 MPGEVVAVRV PLLHLSNFQI NDWPELSTKR YALMVLMLPS DSARQWHAHV LELVEVVADQ 300
  301 VAVALSHAAI LEESMRARDL LMEQNVALDL ARREAETAVR ARNDFLAVMN HEMRTPMHAL 360
  361 IALSSLLQET ELTPEQRLMV ETILKSSNLL ATLINDVLDL SRLEDGSLQL DIGTFNLHAL 420
  421 FREVLNLIKP IASVKKLFVT LSLSSDLPEF AIGDEKRIMQ VLLNVIGNAV KFSKEGSVSV 480
  481 SAVAAKSESL RDPRAPEFFP VQSENHFYLR VQVKDTGSGI SPQDIPKLFN KFAQNQALAT 540
  541 KNSGGSGLGL AICKRFVNLM EGHIWIESEG LGKGCTAVFV VKLGIPGRSN ESKLPFMPRL 600
  601 PPNHMQMIFQ GLKVLVMDDN GFSRMVTKGL LVHLGCDVTT VASGDECLRV LAQEHRVVFM 660
  661 DVSIPGIDCY EVAVRIHEKF NKRHDRPHIV ALTANTDRVI KENCMRAGMD GVILKPVSVD 720
  721 KMRSVLSELL EHGVVLQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle