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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GANAB_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKLVILIIL SIVCSLFIGS IESVDTSKFK TCKDSHFCKR NRVSHEVGVM NEMKSKQNFN  60
   61 IVEGSIKLVK QENTIYFDLQ EQNQKSNLLT MKLEIYEGGI VRMRAQEKEP LLNKQRYQVQ 120
  121 DVLLDTIKTV PIQWKQEPSK QSNTFSFKHG EKECCYVLVQ LVPFKLDVYI MNELAITTNS 180
  181 DNLFHFEPIS DKPQPLPPKE KKSEEENKEA NQEEDNNNNN NDNNEEQQVS TEGYWEERFG 240
  241 SHQDSKPNGP MSIGMDFTFV GSSHVYGIPE HTTRLSLKST TGNGINEQPY RLYNLDVFEY 300
  301 EIDKTMALYG HVPLMISHDT KKTVGVFWLN AAETFVDIED VTTPVSPSKK THWISESGII 360
  361 DVFYLTGPTP STIFKQYAYL TGTTALPQMF SLGYHQCKWN YKSEDDVKQV DNGFDENHIP 420
  421 YDVIWLDIEH TDGKRYFTWD NNNFPTPADM QNIIGAKHRK MVTIVDPHIK RDNNYYVHSE 480
  481 ATSKGYYIKN KDGNDYDGWC WPGSSSYLDF TNPEIRKWWA TQFGYDKYKG STPNLYIWND 540
  541 MNEPSVFNGP EVSMHKDAKH HGGFEHRDVH NLYGYYYHMA SADGLVQRNA DQNDRPFVLS 600
  601 RAFYAGSQRI GAIWTGDNSA QWSHLEISNP MLLSMNLAGI TFSGADVGGF FGNPDAELLT 660
  661 RWYQAGAFQP FFRGHAHLDS RRREPWLFNE PYTTIIREAI VKRYSYLPLW YTTFYQNTLN 720
  721 GAPVMRPLWV QYPKEANLFD VDDHYLIGDS LLVKPVTQQS CKTMKVLLPG QSVNEIWYDV 780
  781 DTEKPINAGV IEIDTPLEKI PVYQRGGSII SKKERVRRST YQMRDDPYTI RIALDSSKSA 840
  841 QGQLYIDDEH SFDYKKGKFL YRQFTFKDNV LSFSDASNKS STSYKPNVTI EKIVILGVQK 900
  901 PHSITCNITG KEKLSFEYDS TLSKLTIRKP DLLVDTDFII KLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle