YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18410316, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGISKTEIN LRRLLSAAPN QQNQSKLMHY VATLREQLEQ LSEEKTPEGL PRVTKAKVNE  60
   61 YYEKIEAVAS KIASQEPETE VSDEPFAKDS TSGSSPKIED EPRSPTSPQL RRRIVPASSK 120
  121 EQSFDAADAD SSKPIKLDTA AQAHIDKHRK LQEDLTDEMV VLARQLKERS QAISQSVQNT 180
  181 EKILDSTEEA IEQSLASTGH ATTRATKIYS QSSKTSCFQW LLIFAMICVF IMVVLLIRVT 240
  241

Type	Start	End	Confidence
Non-Cytoplasmic	1	216	0.63
Transmembrane Helix	217	239	0.89
Cytoplasmic	240	240	0.63