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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16508143
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTLLLVTA LALVQARPNE DADLTNGRLY EVHDDCPPAE VHFLLPHEYD CTKFYYCEYG  60
   61 LKYIEPRNCA SGTEFNAEIQ VCVHPSSSGC SLPGFSTLAP GETAAPTAAP TAAPTAAPTA 120
  121 APTAAPTAAP TAAPTAAPTA APTAAPTAAP TAAPTAAPTA APTAAPTAAP TAAPTAAPTA 180
  181 APTAAPTAAP PVTSDPDDCE TLDNGCPVDF TIHKLIPHEE YCHLFYYCDK GELLLRSCPQ 240
  241 PLYFDPATEV CVWSWETDCV NDGPYTYPTT VAPEIGTTSA PGDNDIGDVL DNGCPVDFSI 300
  301 IHHLPHEECE KYYQCDAGKK IERNCAPGTV FNFAAQACDW PFNVPHCAGS AGATAAPTTE 360
  361 ADSEEIPLPN DPDSWESLPN GCPVDSSISH LVPHESDCDK YYVCDNGRLV QLGCPAGTHF 420
  421 SPSQQFCTWP HEAGCEHWTG GGCTTPGNGG GSCGGSTAAP VDPTTPVAVV TSTSAPISDP 480
  481 STSAPNEPST PVAVVTTTTS APISVPSTSA PNDPTTPVVN SSEEIPLPND PEDLLPNGCP 540
  541 ADFEVDLLLP HETDCDKFYY CVHGEIVEFP CAPGTHFSPA LQACTWPQEA GCEHWSEPST 600
  601 VAPEITVTAV TSTLSVAPDT TAAVPNTPTV APETTTASVT NAPTVAPETT TAAVTNAPTV 660
  661 APETTTAVVT NAPTVAPETT TAVVTNAPTV APVPDPTTVG TTANPACPEC LPGPVNPADK 720
  721 CKEECNVAPW AHAECDKYYT CVGDEFRVNA CAEGLHFNPS TLTCDFICNA GCVRNIPQIT 780
  781 RHVEGMLMFI PHDFNNRDVI DLIEHELNAE L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle