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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|147907344, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRTGGATL LSILQRLYGQ VLGIVEYTDT LQVPGGIKVP VLLEGDSEKF RSFVAELVVC  60
   61 IPRGTKPLPS PVSFLQLSTQ REVVARVIQR ICEKKRKNVL AFGYGLVDEK NSLNIRLTPN 120
  121 ICNYFPNPTT TTISTSILWE TLLTRVGDDV MMYWLEQCSI FVFVPPRCCY QITGQPIYTL 180
  181 PSDDVFLFQS QSFTQSNVLL RYIKRNVFHL RKKYLKPKHS MTSRMLTWRR NKSPSGLLIR 240
  241 SKTSMAVTTE IHSKRKLCSK DICVIPDKKR RDNLDKDDTV DHFDLPMCRS VSYLSNMYPK 300
  301 TNVQVTGLIT SGYKKTKTFQ CQKPVSCEQK KTTAFYSVAG DCNLSLKDNV NKLITNASVP 360
  361 TAQSRLSFSN IFIDFGRTLY LSISYKKGFS ESFILNSLDS TPSGSQKLVE TIFLSNFLAE 420
  421 QNFDQPKRDE NCRYKLPKRY WKMKPHFQEL IQNHKKFPYL VYLNKHCPVR SSMACSEKRS 480
  481 LQKNRIENDG KQLKHFTTKA NLLSLLKQHS SIWQVYMFVR ECLNNVVPDI MWGSSHNKCR 540
  541 FFRNVKSFLF FSGKFGKISL SELMWSMRVE DCSWIRLQKS DHFVPASEHL LREKILAKFV 600
  601 FWLMDTYVIQ LLKSFFYVTE TMFQKHRLLF YRKSVWKKLQ NIGLRKHLEK VKLRSLSSDE 660
  661 LENMQQWKNV PLVSRLRFIP KTNGLRPISK ISSTLSSQQS KENQEKKIHH FSSQIRNLFS 720
  721 VLNYEWNRNC SLIGSSVFGM DDIYKKWKKF VLDFEKPQVE KLQFYFVKTD VKGAYDTIPH 780
  781 SKLDEVISKV INPNANEVYC IRRYATVSVD PTGRIIKSFK RHVSELADVL PNMKQFVSNQ 840
  841 QEKNLLRNTI LVEQNLLLNE SSVKLLAVFQ QIIRSHILRI KDRYYMQCCG IPQGSMLSTI 900
  901 LCSLCYGDME NAMLGGIQKN GVLMRLIDDF LLVTPHLDQA KTFLRTLAEG IPQYGCSISP 960
  961 QKTVVNFPVD DIPECSEVEQ LPSHCLFRWC GLLLDTQTLD VYYDYSSYAC TSIRSSMTFC1020
 1021 HSSAAGKYMK QKLIRVLRLK CHSLFLDLKV NSLRTVCINT YKIFLLQAYR FHACVVQLPF1080
 1081 GQRVMNNPPF FLTVISDMAP CFYTTFKAKN KDLTRGYKDV SCQFNFEAVQ WLSYQAFLTK1140
 1141 LHNHKVLYKC LIGPLQNCKM QLSRRLSQDT IELLKSVTDS SLHKDFSCIM D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle