YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33468670
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILSCGFAEES PCTPGFESKL LVVKVHKDHL HKGERLGRVV FNTCDGRTGI DFQSTDQEID  60
   61 LNMDGTLMMR RSVTLHEGLK EFSVSAWDFS GKKHTVFVRV ERVDYHKDHD RAKRCWILPP 120
  121 LTLHENGKGP FPMRLVLIKS DSASETPMAY KITGEGADQD PKGIFQIDRL SGWVSVTQQL 180
  181 DREKKASYKL VAHATGVDVN IVEKPFEFIV IVADQNDNKP VFNQNPFNAN VPEALEKGEV 240
  241 FMTVTATDAD DKENTDNADI SYAIISQDPP SPKPNMFAIN PVSGGISVLE TGLDRQQWSS 300
  301 YTLVITATDM NGEGGSTTGT AVITVTDSNN NAPLFEQTLY TVSVPENQVG AEVAKLPVTD 360
  361 GDEPESTAWS TKYRVIGGDK DGFFNVSTGP SRLEGVITTV KPLNYEKTKQ YILSVIVVND 420
  421 DKFVGPLPTS TATVTVNVED VNEPPEFIPK EKFIFKPEDL PVGSDLVNYT ATDPDTEKKQ 480
  481 KIIYRIGYDP SVWLSITDSG QIQVKKPMDR ESSNVKDGKY KALILALDDD VESPATGTGT 540
  541 LVIELQDVND NAPVINERTI KLCNRESAPV LLSITDNDGP PFAGPFTVEP QGDTSKNWSV 600
  601 FFNETGHYLS LKPQSQLEQR EYNVVLRVTD REGQSQESAI QASVCDCKGE AFQCTNKQVA 660
  661 GVPLLGFLGI LGGILLFVLL ILKLYILPRY LLFFSSCSCR GKTTPLLSVD DVRVNICYDD 720
  721 EECGGEGDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle