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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6649538
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITHGFYART RHKHKLKKTF IMLSAGLPFF FYVNQNSFAN GENYFKLSSD SKLLTQNAAQ  60
   61 DRLFYTLKTG ETVANISKSQ GISLSVIWSL NKHLYSSESE MMKAGPGQQI ILPLKKLSVE 120
  121 YSALPVLGSA PVVAAGGVAG HTNKMTKMSP DASKSNTTDD KALNYAAQQA ASLGSQLQSR 180
  181 SLNGDYAKDT ALGMASSQAS SQLQAWLQHY GTAEVNLQSG NNFDGSSLDF LLPFYDSENM 240
  241 LAFGQVGARY IDSRFTANLG AGQRFFLPEN MLGYNVFIDQ DFSGDNTRLG IGGEYWRDYF 300
  301 KSSVNGYFRM SGWHESYNKK DYDERPANGF DIRFNGYLPS YPALGAKLMY EQYYGDNVAL 360
  361 FNSDKLQSNP GAATVGVNYT PIPLVTMGID YRHGTGNEND LLYSMQFRYQ FDKPWSQQIE 420
  421 PQYVNELRTL SGSRYDLVQR NNNIILEYKK QDILSLNIPH DINGTEHSTQ KIQLIVKSKY 480
  481 GLDRIVWDDS ALRSQGGQIQ LGGSKSAQDY QAILPAYVQG GTNIYKVTAR AYDANGNSSN 540
  541 NVQLTITVLP NGQVVDQVGV TDFTADKTSA KADGIEAITY TATVKKNGVA QANVPVTFSI 600
  601 VSGTATLGAN SARTDGNGKA TVTLKSATPG QVVVSAKTAE MTSPLNASAV IFVDQTKASI 660
  661 TEIKADKTTA KADGSDAITY TVRVMKEGAP EVDQKVTFSK DFGTLNKTEA TTDQNGYATV 720
  721 KLSSNTPGKA IVSAKVSGVG TEVKATTVEF FAPLSIDGDK VTVIGTGITG ALPTNWLQYG 780
  781 QVKLQATGGN GKYTWKSSNT KIASVDNSGV ITLNEKGSAT ITVVSGDNQS ATYTINAPGS 840
  841 IVIAVDKNTR VTYFDAENKC KTNSANLAQS KELLANIYST WGPANKYPYY SGSKSLTAWI 900
  901 KQSSSEQSSG VSSTYDLVTK NQLINVGVNN KNAFPVCVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle