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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11067034
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGTGNDKY KLAATSEDEA KAPRKGKKKQ KDMDELKKEV DLDDHKLTLD ELHRKYGTDL  60
   61 TRGLSSSRAK EVLARDGPNA LTPPPTTPEW VKFCKQLFGG FSTLLWIGAI LCFLAYGIQA 120
  121 ASEDDPTNDN LYLGIVLAGV VIITGCFSYY QEAKSSKIME SFKNLVPQQA LVVRDGEKKS 180
  181 INAEEVVAGD LVEVKGGDRI PADLRIISAH GCKVDNSSLT GESEPQTRTP DFSNDNPLET 240
  241 RNIAFFSTNC VEGTARGIVI NTGDRTVMGR IATLASSLEG GQTPIAKEIE HFIHIITGVA 300
  301 VFLGVSFFIL SLILGYGWLE AVIFLIGIIV ANVPEGLLAT VTVCLTLTAK RMAKKNCLVK 360
  361 NLEAVETLGS TSTICSDKTG TLTQNRMTVA HMWFDSQIHE ADTTENQSGT TFDRSSPTWS 420
  421 ALARVAGLCN RAVFLADQRN VPILKRDTAG DASESALLKC IELCCGSVNE MREKYTKIAE 480
  481 IPFNSTNKYQ LSIHKNPNSS EPKHLLVMKG APERILDRCS TILIQGKQQP LDEEMKDAFQ 540
  541 NAYVELGGLG ERVLGFCHFC LPDDQFPEGF AFDTEEVNFP TENLCFVGLM SMIDPPRAAV 600
  601 PDAVGKCRSA GIKVIMVTGD HPITAKAIAK GVGIISEGNE TVEDIAARLN IPVGEVNPRD 660
  661 AKACVVHGGE LKSMSEEELD DILKHHTEIV FARTSPQQKL IIVEGCQRQG AIVAVTGDGV 720
  721 NDSPALKKAD IGVAMGIAGS DVSKQAADMI LLDDNFASIV TGVEEGRLIF DNLKKSIAYT 780
  781 LTSNIPEISP FLLFIIANIP LPLGTVTILC IDLGTDMVPA ISLAYESAES DIMKRQPRNA 840
  841 KTDKLVNERL ISMAYGQIGM MQAVAGFFSY FVILAENGFL PSDLVGIRVN WDDKYVNDLE 900
  901 DSYGQQWTYE RRKIVEFTCH TAFFASIVIV QWADLIICKT RRNSIVQQGM RNKILIFGLF 960
  961 EETALAAFLS YCPGMDVALR MYPLKPCWWF CAFPYSLLIF VYDEARRYIL RRSPGGWVEQ1020
 1021 ETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle