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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XPR1_MUSDU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAEHLSAH ITPEWRKQYI QYEAFKDMLY SAQDQAPSVE VTDEDTVKRY FAKFEEKFFQ  60
   61 TCEKELAKIN TFYSEKLAEA QRRFATLQNE LQSSLDVQKE SSGVTTLRQR RKPVFHLSHE 120
  121 ERVQHRNIKD LKLAFSEFYL SLILLQNYQN LNFTGFRKIL KKHDKILETS RGADWRVIHV 180
  181 EVAPFYTCKK INQLISETEA VVTNELEDGD RQKAMKRLRV PPLGAAQPAP AWTTFRVGLF 240
  241 CGIFIVLNIT LVFAAVFKLE TDRTVWPLIR IYRGGFLLIE FLFLLGINTY GWRQAGVNHV 300
  301 LIFELNPRNN LSHQHLFEIA GFLGILWCLS LLACFFAPIS VIPIYVYPLA LYGLMVFFLI 360
  361 NPTKTFYYKS RFWLLKLLFR VFTAPFHKVG FADFWLADQL NSLSVILMDL EYMICFYSFE 420
  421 LKWDESKGLL PNDPQEPEFC HKYSYGVRAI VQCIPAWLRF IQCLRRYRDT RRAFPHLVNA 480
  481 GKYSTTFFTV TFAALYSTHK EQNHSDTVVF FYLWVFFCII SSCYTLIWDL KMDWGLFDKN 540
  541 AGENTFLREE IVYPQKAYYY CAIIEDVILR FAWTIQISIT ATTFKPHVGD IIATVFAPLE 600
  601 VFRRFVWNFF RLENEHLNNC GEFRAVRDIS VAPLNADDQT LLEQMMDQED GVRNRQKNRS 660
  661 WKYNQSISLR RPRLASQSKA RDTKVLIEDT DDEANT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle