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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6425002
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRWFTLLL GVALLQSALS FGPIEVTDDE WIEYRNMMRD PAYRLPTTTR PSNYVVNLTP  60
   61 YFTGTTLAFT FDGTVTITFR ATQANVNEIV LHCNDLTIQT LTVATAASPN VNLAASGQTF 120
  121 TCDPVYSFLR IRTAGVLAEN TDYIIQSTYR GNLQTNMRGF YRSWYIDSSG TKRWMATTQF 180
  181 QPGHARQAFP CYDEPGFKAT FDITINREAD FSPSLSNMPI RSTTNVGARV AETFYTTPVM 240
  241 STYLVAFIVS HYTQVATHSN QQRPFAIYAR NNIGNHGNHA LDVGVPLLDV MERYTDIPYY 300
  301 TMATNMNMKQ VAIPDFSAGA MENWGLLTYR EALILYDPQN SNSFYRQRIP NIISHEIAHM 360
  361 WFGNLVTCAW WDNLWLNEGF ARFYQYYLTG VVSPEMGYDT RFIVEQVHTS LLSDSIDSAH 420
  421 ALTDPSVNDP AAVSAHFSTI TYAKGASVLR MTQHLLGNDT YVKGLRSYLK DNAYGVAEPA 480
  481 DLFRALDAAA AADNALANYG GITIDRYLRS WSEKAGHPLL TVSVDHSTGR MTIIQTRFER 540
  541 NSGVSSSNSL WDIPITWTRA RAIDFENLKP TQFVTGVLTV IERRTTGREW VIFNKQQSGF 600
  601 YRVNYDQITC GLITEALRSN VRTSIHEYNR AQIVDDVMLL ARAGVLTYSR ALNILSFLKF 660
  661 EDQYAPWIAA ITGFNFALRR LAHDTVAHQN LRNEIIDLSS AIVARLGTAS QLQGTFMDNL 720
  721 LRMYVMTFLC DIGHQGCINA AVTNFAAWKN GGTVPANMRP WVFCSGLRYG DASDFTYLWS 780
  781 RYTSSNVAND QLVMLSAAGC TLNQASLNLF LNAIVSGSDD IRPQDYSSAI ASAVRSNEEN 840
  841 TMRVFTWLQS NVQQTTTTLG SVSPILNEIT ARLLNEAQIT QVQTWVNANQ NAIGSAAHAS 900
  901 AISGIAGARA NIEWYNRRVP EFNAYFETGY VEENFFETTT TTTTTTTTTT TTTTEAPTTT 960
  961 TTEAPTTTST TTTTTPAPTT EATTTPVPDS ANIATLSIVT LIVTLVVNMA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle