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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3641252
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFLPLLLL LLLPPLPTTL SLNQEGLYLR HFKLSLDDPD SALSSWNYAD STPCNWLGVT  60
   61 CDDASSSSPV VRSLDLPSAN LAGPFPTVLC RLPNLTHLSL YNNSINSTLP PSLSTCQTLE 120
  121 DLDLAQNLLT GALPATLPDL PNLKYLDLSG NNFSGAIPDS FGRFQKLEVL SLVYNLIENT 180
  181 IPPFLGNIST LKMLNLSYNP FHPGRIPAEL GNLTNLEVLR LTECNLVGEI PDSLGRLKNL 240
  241 KDLDLAINGL TGRIPPSLSE LTSVVQIELY NNSLTGELPP GMSKLTRLRL LDASMNQLSG 300
  301 QIPDELCRLP LESLNLYENN LEGSVPASIA NSPNLYEVRL FRNKLSGELP QNLGKNSPLK 360
  361 WFDVSSNQFT GTIPASLCEK GQMEEILMLH NEFSGEIPAR LGECQSLARV RLGHNRLSGE 420
  421 VPVGFWGLPR VYLMELAENE LSGPIAKSIA RATNLSLLIL AKNKFSGPIP EEIGWVENLM 480
  481 EFSGGDNKFS GPLPESIVRL GQLGTLDLHS NEVSGELPVG IQSWTNLNEL NLASNQLSGK 540
  541 IPDGIGNLSV LNYLDLSGNR FSGKIPFGLQ NMKLNVFNLS YNQLSGELPP LFAKEIYRNS 600
  601 FLGNPGLCGD LDGLCDSRAE VKSQGYIWLL RCMFILSGLV FVVGVVWFYL KYKNFKKVNR 660
  661 TIDKSKWTLM SFHKLGFSEY EILDCLDEDN VIGSGASGKV YKVVLNSGEV VAVKKLWRRK 720
  721 VKECEVEDVE KGWVQDDGFE AEVDTLGKIR HKNIVKLWCC CTARDCKLLV YEYMQNGSLG 780
  781 DLLHSSKGGL LDWPTRFKIA LDAAEGLSYL HHDCVPAIVH RDVKSNNILL DGDFGARVAD 840
  841 FGVAKEVDAT GKGLKSMSII AGSCGYIAPE YAYTLRVNEK SDIYSFGVVI LELVTGRLPV 900
  901 DPEFGEKDLV KWVCTTLDQK GVDNVVDPKL ESCYKEEVCK VLNIGLLCTS PLPINRPSMR 960
  961 RVVKLLQEVG TEKHPQAAKK EGKLTPYYYE DTSDHGSVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle