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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29561768, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLRFFQSL LISTVICFFL PSINARGGHS DHIHPGDGNY SFHGIVRHLF AQEEPTPSLE  60
   61 LTRGYMTNDD LEKAMKDFTK RCSKISRLYK GFLERAFSIG KSVNGFPLWV IEISDRPGEI 120
  121 EAEPAFKYIG NVHGDEPVGR ELLLRLANWI CDNYKKDPLA QMIVENVHLH IMPSLNPDGF 180
  181 SIRKRNNANN VDLNRDFPDQ FFPFNDDLNL RQPETKAIMT WLRDIRFTAS ATLHGGALVA 240
  241 NFPWDGTEDK RKYYYACPDD ETFRFLARIY SKSHRNMSLS KEFEEGITNG ASWYPIYGGM 300
  301 QDWNYIYGGC FELTLEISDN KWPKASELST IWDYNRKSML NLVASLVKTG VHGRIFSLDK 360
  361 GKPLPGLVVV KGINYTVKAH QTYADYHRLL VPGQKYEVTA SSPGYKSKTT TVWLGENAVT 420
  421 ADFILIPETS SRGNQLRSSC DCSCKSCGQP LLTQFFTETN NGITLTLFVV VVFLCFLLQR 480
  481 RVRFNLWKQR QSSRRSITV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle