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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15291623
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEGKRLEAT ATLNVNYYPR VEVGPENPLR VERDRTAKLE CNVDAKPKVP NVRWNRNGRF  60
   61 ISSSLVHTIH RVSVQDAGKY TCIADNGLGK TGEQELILDI LYPPMVVIES KTREAEEGDT 120
  121 VTIRCNVTAN PAPVTIEWLK ENSPDFRYNG DVLTLTSVRA DHAGNYICRA VNIMQSQGME 180
  181 RSERVGNSTV ALLVRHRPGQ AYITPNKPVV HVGNGVTLTC SANPPGWPVP QYRWFRDMDG 240
  241 EFSSTQKILA QGPQYSIPKA HLGNEGKYHC HAVNELGIGM MATIVLEIHQ PPQFLAKLQQ 300
  301 HMTRRVADTD YTVTCSAKGK PAPSVKWLKD AVEILPEENL YEVQTNPDQG LNGMVTVQSQ 360
  361 LKFRGKARPN GNALVPGDRG LYTCLYQNEV NSANSSMQLR IEHEPIVLHQ YNKVAFDIRE 420
  421 TAEVVCKVQA YPKPEFQWQF GNNPSPLTMS SDGHYEISTT TDNNDIYTSV LKINSLTHSD 480
  481 YGEYTCRVAN TLDTIRAPIR LQQKGPPEKP TNLRATEVGH NYVSLSWDPG FDGGLSKTKF 540
  541 FVSYRRVAMP REEQLIPDCA TLANSNSAWV EVDCQRDIPC KVTALEQHQS YAFKVKALNP 600
  601 KSDSPYSSEI MVTTKVSRIP PPLQVTYEPN TRTLGIDVGA TCLNLVAVVE SMVNADSPMA 660
  661 AWEVVTTMDN LQLSGNGPTH KEKIIDRIIG ARRVGGGRAL GHTISEDEDD NGLNSLALED 720
  721 ENSPTVRVKL CLRTNPEHCG DYTDAEIGRP YIAEANALAT PTLIAIIVSC VVFALFAGLI 780
  781 LMFCRCKRNQ SKKSAAAKDY EMDSVRPSIV AAQQNQAPPP YYPASGLDNK ALEHSMDLAL 840
  841 SMEDQKTALY ATQNGYSYHP GSGVVGVGMG GGVVGVGVGG SVVSGMGGGV GGIGGSGVGV 900
  901 NGIPGLSAHT MPGNEWVNMG YMENNYSNSN NGGSVNSQDS LWQVKMSAAA VGNQQGMVQA 960
  961 PMNQYVEQQP AYGYDPLTHG GYGAVDDYAP YPHLTATPSQ VGDEYHNLRN SQNPSRQDYC1020
 1021 SDPYASVQKP KKRVDQHLDS PYHDVSGLPN PYNMEHLEQD EVLPPQQHMS LSYDDSFEGE1080
 1081 YSTTPNARNR RVIREIIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle