YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXL2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRNSINIHH VTSFSSSPFW CVFFLVLLCK TSTNALVKQP PNETTPAIIV FGDSIVDAGN  60
   61 NDDIMTTLAR CNYPPYGIDF DGGIPTGRFC NGKVATDFIA GKFGIKPSIP AYRNPNLKPE 120
  121 DLLTGVTFAS GGAGYVPFTT QLSTYLFIYK PLLFLKGGIA LSQQLKLFEE YVEKMKKMVG 180
  181 EERTKLIIKN SLFMVICGSN DITNTYFGLP SVQQQYDVAS FTTLMADNAR SFAQKLHEYG 240
  241 ARRIQVFGAP PVGCVPSQRT LAGGPTRNCV VRFNDATKLY NVKLAANLGS LSRTLGDKTI 300
  301 IYVDIYDSLL DIILDPRQYG FKVVDKGCCG TGLIEVALLC NNFAADVCPN RDEYVFWDSF 360
  361 HPTEKTYRIM ATKYFERYV

Type	Start	End	Confidence
Signal Peptide	1	35	0.96
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	379	0.99