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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB2D_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILMITAPVC PPHLLLRHSS LLRHESSIGN FHRKKNPRFR TVSCSSLLPQ PSVRPDKASE  60
   61 LKTLWKKFYK VASPYWFSED KDQARLRLAA VFALTLATTG ISVGFNFLGR DFYNSLANKD 120
  121 QEQFTKQLFY YLCAFAGGIP FFVLRDYTKE TLSLRWRSWM TKYYLQRYLK DQTFYKIQSQ 180
  181 SIIDNPDQRL VDDLSSFTGT ALSFSLTLVN ATIDLISFSN ILFTIYPPLF LVLLLYSFGG 240
  241 TAISVFLGKG LVNLNFLQEK KEADFRYSLV RVRENAESIA FYGGEQNEMQ LLLQRFRSAF 300
  301 DNLTELLIAS RNLEFFTDGY RYLIQILPVA VVAPMYFSGK IEFGVINQSV SAFNHILGDF 360
  361 SLVVYQFQAI SSFSAVIDRL GEFDDLLDNN IFRDPSDTVD EIELTYQSEM NSSLLDTNGS 420
  421 IKSQPNQKRL EIEELTLQTP TNGTTLVHNL SADVYDKDHL LIMGPSGSGK TSLLRAMAGL 480
  481 WRSGKGKITF YLDPEVDFTQ EKSDTQENSG KRGDVLFLPQ RPYMVLGSLR QQLLYPTWSA 540
  541 TVEETTPGGS NIDGSPPLLI REDGNEKPTT DDLMRTLEKV CLGHIADRFG GLDSIHEWSS 600
  601 VLSLGEQQRL AFARLLLSQP KLALLDESTS ALDEANEAFL YQQIQSAGIT YISIGHRRTL 660
  661 TKFHNKILQI STADPKSNER NWRIEDVDAQ DSLYGRLNQK EVPSES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle