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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10441335
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.71
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSLIKSLAT FVTLFSLTLA KFESSTPPIE VIGNKFYFSN NGSQFLIRGI AYQQDAAGSV  60
   61 SSGYDADPNR KYTDPLADAD ACKRDVKYFK ESNTNALRVY AIDPEKDHEE CMKIFSDAGI 120
  121 YIVADLSEPT VSINRNSPEW NLDLYERYTK VVDNMQEYSN VLGFFAGNEV TNNRSNTDAS 180
  181 PFVKAAIRDM KKYLKDSNYG EIPVGYSSND DEEIRVAIAD YFSCGSLDDR ADFFGINMYE 240
  241 WCGKSTFESS GYKDRTEEIK NLTIPAFFSE YGCNANRPRL FQEIGTLFSD KMTDVWSGGI 300
  301 VYMYYEEANK YGLVSVDGDS VKTLSDYNNY KSEMNKISPS LAHTSTLSSS EASKTLECPG 360
  361 TAASTWKAAT KLPPTPDKDY CDCVSKSFEC VVADSVEKED YGDLFAQVCG YIDCSAISAD 420
  421 GNKGDYGVAS FCSDKDRLSY VLNEYYIDQD KKSSACDFKG SASINSKASS SGSCKAVSGV 480
  481 ATGKDSASGG SSKSGSGSAS SSASGSSSSS TSSGSSSSSG NKSTQQMSMV KLVSITTIVT 540
  541 AFVGGMSIIF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle