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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25365089, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLLRMNRL LSSIVESCNC IIDPQLPADD LLMKYQYISD FFIALAYFSI PVELIYFVKK  60
   61 SAVFPYRWVL VQFGAFIVLC GATHLINLWT FNMHTRNVAI VMTTAKALTA LVSCITALML 120
  121 VHIIPDLLSV KTRELFLKKK AAQLDREMGI IRTQEETGRH VRMLTHEIRS TLDRHTILKT 180
  181 TLVELGRTLA LEECALWMPT RTGLELQLSY TLRHQNPVGL TVPIQLPVIN QVFGTNHVVK 240
  241 ISPNSPVARL RPAGKYMPGE VVAVRVPLLH LSNFQINDWP ELSTKRYALM VLMLPSDSAR 300
  301 QWHVHELELV EVVADQVAVA LSHAAILEES MRARDLLMEQ NVALDLARRE AEMAVRARND 360
  361 FLAVMNHEMR TPMHAIIALS SLLQETDLTP EQRLMVETIL KSSNLLATLI NDVLDLSRLE 420
  421 DGSLQLDIGT FNLHALFREV HSLIKPIASV KKLFVTLSLS SDLPEYVIGD EKRLMQILLN 480
  481 VVGNAVKFSK EGNVSISAFV AKSDSLRDPR APEFFAVPSE NHFYLRVQIK DTGIGITPQD 540
  541 IPNLFSKFTQ SQALATTNSG GTGLGLAICK RFVNLMEGHI WIESEGLGKG STAIFIIKLG 600
  601 IPGRANESKL PFVTKLPANH TQMSFQGLKV LVMDENGVSR MVTKGLLTHL GCDVTTVGSR 660
  661 DECLRVVTHE HKVVIMDVSM QGIDCYEVAV VIHERFGKRH GRPLIVALTG NTDRVTKENC 720
  721 MRVGMDGVIL KPVSVYKMRS VLSELLEHGV VLES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle